Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871655.1_cds_XP_016434471.1_30525
CDS Infomation

[gene=LOC107760875] [db_xref=GeneID:107760875] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016434471.1] [location=complement(join(105028..105614,105724..106646,106866..107311))] [gbkey=CDS]
Sequence

ATGGATATATTTTATTTAGAACTAGTTCTGGAAAAACCCCAAAATATCTTTTATGTACTC
AAATCTTCATTTTCTTCATCTTGTATATACAAATTACTCTATATTACTTTACAAGTCTTC
TTAAGTATGGAAAGAAGCGTAGCTAATGAGGCATCAAAGGCCACAATAATGGCGGAGGAC
TACAAGAAGGATCTTGAGTTCATTGAAGAGGTGACTAGCAATGTTGATGATGTCCAGAGG
AGAGTTCTTGCTGAAATCATCTCCCAGAATGTGCATGTTGAGTACTTGCAGCGTCATAAT
CTCAATGGCAGCACTGATAGAGACACATTCAAGAAAGTCGTACCTGTCATCACTTACGAA
GATATCCAGCTTGATATCAACCGCATAGCCTATGGTGATAAATCTCCTATCCTCTGCTCC
CAACCCATCTCTGAATTATTGTCAAGTTCTGGCACGTCTGGAGGGGAGAGCAAATTGATA
CCATCAACAGAGGCAGCGCTTGGGAGGAGATTACAGCTTCTCAAACTTCTGATGTCTGTG
ATGAGCCAAGTGGCTCCAGATTTTGGAAAGGGTAAAGGAATGTATTTCATGTTCATAAGT
TCTGAACAGAAGACCCCAGGAGGATTACTAGCTCGGTTTTTTACTACTAGTTTTTACAAG
AGTCCTTATATCAACTGCGGATACCCCTGCAGGAAATTCACTAGTCCAACGGCAACCATT
CTCTCCCAAGACTCTTACCAAAGTATGTACTCTCAAATGCTCTGTGGCCTCTGCCAAAAC
CAAGAAGTCCTCCGTGTTGGCTCACTTTTTGCAACCGGCTTCATTCGTGGCATCCGTTTC
TTGGAGAAGCATTGGTCTCTACTTTGTAACGATATCCGAAACGGAACCATTAACACTCAA
ATTACAGATCCTTCAGTGAGAGAAGCAGTGATGGAAATCCTCAAACCTGACCCAAAATTA
GCTGATTTCATTGAGGCTGAATGCAGCAAAGACTCATGGCAAGGAATCATCACTAGGTTG
TGGCCTAATACCAAGTATGTGGATGCTATTTTGACTGGATCCATGTCACAATATATACCG
ATACTTGATTATTACAGCAATAGCCTCCCTCTTATCAGTACTTTGTATGGTTCCTCAGAA
TGCCACTTTGGAATCAACTTGAACCCTTTCTGTAAGCCCAGTGAAGTCTCTTACACCCTT
ATCCCCACCATGTGCTATTTTGAGTTCTTACCATATCACGGAAATAGTGGAGTCACTGAT
TCTATCTCCATGCCCAAGTCGCTTAATGAGAAAGAACAACAACAATTGGTTGATTTGGCC
GATGTCGAGATTGGTCAGGAGTACGAGCTTGTTGTTACCACATATTCTGGACTCTACAGA
TATAGAGTCGGTGATGTGCTTCGGGTTGCTGGATACAAGAACAATGCGCCTCGATTCAAC
TTCCTATGCCGGGAAAATGTAATCTTGAGCATTGGTGCTGACTTTACTAATGAAGTTGAG
CTACAAAATGCAGTGAAAAATGCAGTGGGTAATCTGATGCCATTTGATTCTCAGGTAACC
GAGTACACCAGTTATGTCGATATTACCACCATTCCAAGCCATTATGTCTTATTCTGGGAG
CTGAGTGCGAATGACTCTACCCCAGTTCCTCCGTCAGTCTTCGAAGATTGTTGCCTCACA
ATTGAAGAATCTCTAAACTACTTCTACCGCGAGGGCCGTGCGTCTAATGAATCCATCGGG
CCTCTAGAAATTAGGGTGGTGGAAAATGAAACTTTTGACAAGCTCATGGACTACTGCAGT
AGCTTAGGTGCTTCCATGAACCAATACAAGACGCCCCGTTGTGTGAAATATGCACCCCTC
ATTGAGATGTTGAATTCAAGGGTCGTATCCAACTACTTCAGTCCCACGTGTCCAAAATGG
GTTCCTGGCTACAAGAAATGGAACAACACCAATTAA

Peptide Sequence

PEP ID

XP_016434471.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MDIFYLELVLEKPQNIFYVLKSSFSSSCIYKLLYITLQVFLSMERSVANEASKATIMAED
YKKDLEFIEEVTSNVDDVQRRVLAEIISQNVHVEYLQRHNLNGSTDRDTFKKVVPVITYE
DIQLDINRIAYGDKSPILCSQPISELLSSSGTSGGESKLIPSTEAALGRRLQLLKLLMSV
MSQVAPDFGKGKGMYFMFISSEQKTPGGLLARFFTTSFYKSPYINCGYPCRKFTSPTATI
LSQDSYQSMYSQMLCGLCQNQEVLRVGSLFATGFIRGIRFLEKHWSLLCNDIRNGTINTQ
ITDPSVREAVMEILKPDPKLADFIEAECSKDSWQGIITRLWPNTKYVDAILTGSMSQYIP
ILDYYSNSLPLISTLYGSSECHFGINLNPFCKPSEVSYTLIPTMCYFEFLPYHGNSGVTD
SISMPKSLNEKEQQQLVDLADVEIGQEYELVVTTYSGLYRYRVGDVLRVAGYKNNAPRFN
FLCRENVILSIGADFTNEVELQNAVKNAVGNLMPFDSQVTEYTSYVDITTIPSHYVLFWE
LSANDSTPVPPSVFEDCCLTIEESLNYFYREGRASNESIGPLEIRVVENETFDKLMDYCS
SLGASMNQYKTPRCVKYAPLIEMLNSRVVSNYFSPTCPKWVPGYKKWNNTN

Transcript Sequence

Gene sequence data has not been registered.